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- Revision of the Echini, Parts 1-4
- The Panamic Deep Sea Echini...
- Letters and Recollections of Alexander Agassiz with a Sketch of his Life and Work
- Three Cruises of the United States Coast and Geodetic Survey Steamer Blake, in the Gulf of Mexico, in the Caribbean Sea, and Along the Atlantic Coast of the United States, from 1877 to 1880, Volume 2