- Perl Programming for Medicine and Biology (Series in Biomedical Informatics)
- Ruby Programming for Medicine and Biology (Jones and Bartlett Series in Biomedical Informatics)
- Taxonomic Guide to Infectious Diseases: Understanding the Biologic Classes of Pathogenic Organisms
- Methods in Medical Informatics: Fundamentals of Healthcare Programming in Perl, Python, and Ruby
- Data Simplification: Taming Information with Open Source Tools